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Antibodies

5-Methylcytosine (5-mC) antibody (mAb)

Clone: 33D3
Catalog No: 39649 Format: 50 µg $350 Buy Now
Antibody Type:Monoclonal
Host:Mouse
Isotype:IgG
Purification:Protein A Chromatography
Applications:DB, FACS, IHC, IP, MeDIP
Reactivity:Other (Not Species Specific)

Applications Table

Western Blot Chromatin IP Immunoprecipitation
1 µg per IP

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Background

5-Methylcytosine (5-Methylcytidine) is a modified base that is found in the DNA of plants and vertebrates. DNA methylation is an epigenetic event in which DNA methyltransferases (DNMTs) catalyze the reaction of a methyl group to the fifth carbon of cytosine in a CpG dinucleotide. This modification helps to control gene expression and is also involved in genomic imprinting, while aberrant DNA methylation is often associated with disease. The 5-methylcytidine antibody (Clone 33D3) has been developed to discriminate between the modified base and its normal cytosine counterpart, allowing for gene promoter methylation analysis.

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Immunogen

Clone 33D3 recognizes the modified base 5-methylcytidine found in plant and vertebrate DNA.

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Application Notes

This 5-Methylcytosine antibody has been validated for use in applications including flow cytometry (1:500), dot blot (1:1,000) immunohistochemistry (1:500) and methylated DNA immunoprecipitation (MeDIP, 1 µg per IP).

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Buffer

Purified IgG in 10 mM phosphate, 0.15 M NaCl and 0.01% thimerosal. Thimerosal is highly toxic.

Bridging Antibody to Improve ChIP, MeDIP and IP

Some isotypes of mouse IgG antibodies do not bind well to protein G-conjugated agarose/magnetic beads, which are commonly used in ChIP, MeDIP and IP experiments. Capture efficiency can be improved by including an anti-mouse IgG bridging antibody because it binds with a strong affinity to both the protein G beads and the mouse IgG antibody. By increasing the affinity of the mouse primary antibody for the protein G bead, the Bridging Antibody for Mouse IgG can help improve the results of all ChIP, MeDIP and IP experiments that use 5-Methylcytosine (5-mC) antibody (mAb).

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)References

Reynaud, C. and Nivelleau A. (1990) Annal. Letters 23: 31-45. Sasco, A.J. et. al. (1996) Cancer Letters 108: 157-162. Rougier, N. et. al. (1998) Genes and development 14: 2108-2113. Habib, M. et. al. (1999) Exp. Cell Res. 249: 46-53

 
5-Methylcytosine (5-mC) antibody (mAb) tested by MeDIP analysis.

5-Methylcytosine antibody (mAb) (Clone 33D3) tested by Methyl-DNA Immunoprecipitation (MeDIP).
Human DNA (500 ng) digested with Mse I was subjected to MeDIP and then analyzed by quantitative real-time PCR with primers specific for genes that are normally methylated (Xist, NYESO and SNRPN) or unmethylated (APC and p48). The MeDIP'd DNA (enriched DNA) was plotted.

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Storage

Antibodies in solution can be stored at -20°C for 2 years. Avoid repeated freeze/thaw cycles and keep on ice when not in storage.

for 5-Methylcytosine (5-mC) antibody (mAb) (Clone 33D3)Guarantee

This product is guaranteed for 6 months from date of receipt.

This product is for research use only and is not for use in diagnostic procedures.

Application Key

  • ChIP = Chromatin Immunoprecipitation;
  • DB = Dot Blot;
  • ELISA = Enzyme-linked Immunosorbent Assay;
  • EMSA = Electrophoretic Mobility Shift Assay
  • FACS = Flow Cytometry;
  • ICC = Immunocytochemistry;
  • IF = Immunofluorescence;
  • IHC = Immunohistochemistry;
  • IP = Immunoprecipitation;
  • MeDIP = Methyl-DNA Immunoprecipitation;
  • TR-FRET = Time-Resolved Fluorescence Resonance Energy Transfer;
  • WB = Western Blotting
 

Technical Data Sheet

5-Methylcytosine (5-mC) antibody (mAb)
 

Data Thumbnails

5-Methylcytosine (5-mC) antibody (mAb) tested by MeDIP analysis.

MeDIP of 5-Methylcytosine (5-mC) antibody (mAb).
(Click image to enlarge and see details.)